IronSulferCluV1, Main, Exploration, bibRecord, 000078

Metabolic Adaptation to Sulfur of Hyperthermophilic Palaeococcus pacificus DY20341T from Deep-Sea Hydrothermal Sediments.

Identifieur interne : 000078 ( Main/Exploration ); précédent : 000077; suivant : 000079

Metabolic Adaptation to Sulfur of Hyperthermophilic Palaeococcus pacificus DY20341T from Deep-Sea Hydrothermal Sediments.

Auteurs : Xiang Zeng [République populaire de Chine] ; Xiaobo Zhang [République populaire de Chine] ; Zongze Shao [République populaire de Chine]

Source :

International journal of molecular sciences [ 1422-0067 ] ; 2020.

RBID : pubmed:31935923

Descripteurs français

KwdFr :
- Adaptation physiologique (MeSH), Cheminées hydrothermales (microbiologie), Ferrosulfoprotéines (génétique), Ferrosulfoprotéines (métabolisme), Hydrogenase (génétique), Hydrogenase (métabolisme), Océans et mers (MeSH), Protéines bactériennes (génétique), Protéines bactériennes (métabolisme), Soufre (métabolisme), Thermococcaceae (génétique), Thermococcaceae (métabolisme), Transcriptome (MeSH).
MESH :
- génétique : Ferrosulfoprotéines, Hydrogenase, Protéines bactériennes, Thermococcaceae.
- microbiologie : Cheminées hydrothermales.
- métabolisme : Ferrosulfoprotéines, Hydrogenase, Protéines bactériennes, Soufre, Thermococcaceae.
- Adaptation physiologique, Océans et mers, Transcriptome.

English descriptors

KwdEn :
- Adaptation, Physiological (MeSH), Bacterial Proteins (genetics), Bacterial Proteins (metabolism), Hydrogenase (genetics), Hydrogenase (metabolism), Hydrothermal Vents (microbiology), Iron-Sulfur Proteins (genetics), Iron-Sulfur Proteins (metabolism), Oceans and Seas (MeSH), Sulfur (metabolism), Thermococcaceae (genetics), Thermococcaceae (metabolism), Transcriptome (MeSH).
MESH :
- chemical , genetics : Bacterial Proteins, Hydrogenase, Iron-Sulfur Proteins.
- chemical , metabolism : Bacterial Proteins, Hydrogenase, Iron-Sulfur Proteins, Sulfur.
- genetics : Thermococcaceae.
- metabolism : Thermococcaceae.
- microbiology : Hydrothermal Vents.
- Adaptation, Physiological, Oceans and Seas, Transcriptome.

Abstract

The hyperthermo-piezophilic archaeon Palaeococcus pacificus DY20341^T, isolated from East Pacific hydrothermal sediments, can utilize elemental sulfur as a terminal acceptor to simulate growth. To gain insight into sulfur metabolism, we performed a genomic and transcriptional analysis of Pa. pacificus DY20341^T with/without elemental sulfur as an electron acceptor. In the 2001 protein-coding sequences of the genome, transcriptomic analysis showed that 108 genes increased (by up to 75.1 fold) and 336 genes decreased (by up to 13.9 fold) in the presence of elemental sulfur. Palaeococcus pacificus cultured with elemental sulfur promoted the following: the induction of membrane-bound hydrogenase (MBX), NADH:polysulfide oxidoreductase (NPSOR), NAD(P)H sulfur oxidoreductase (Nsr), sulfide dehydrogenase (SuDH), connected to the sulfur-reducing process, the upregulation of iron and nickel/cobalt transfer, iron-sulfur cluster-carrying proteins (NBP35), and some iron-sulfur cluster-containing proteins (SipA, SAM, CobQ, etc.). The accumulation of metal ions might further impact on regulators, e.g., SurR and TrmB. For growth in proteinous media without elemental sulfur, cells promoted flagelin, peptide/amino acids transporters, and maltose/sugar transporters to upregulate protein and starch/sugar utilization processes and riboflavin and thiamin biosynthesis. This indicates how strain DY20341^T can adapt to different living conditions with/without elemental sulfur in the hydrothermal fields.

DOI: 10.3390/ijms21010368
PubMed: 31935923
PubMed Central: PMC6981617

Affiliations:

République populaire de Chine

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000162
to stream Main, to step Curation: 000162

Le document en format XML

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 DY20341<sup>T</sup>
 from Deep-Sea Hydrothermal Sediments.</title>
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<term>Bacterial Proteins (metabolism)</term>
<term>Hydrogenase (genetics)</term>
<term>Hydrogenase (metabolism)</term>
<term>Hydrothermal Vents (microbiology)</term>
<term>Iron-Sulfur Proteins (genetics)</term>
<term>Iron-Sulfur Proteins (metabolism)</term>
<term>Oceans and Seas (MeSH)</term>
<term>Sulfur (metabolism)</term>
<term>Thermococcaceae (genetics)</term>
<term>Thermococcaceae (metabolism)</term>
<term>Transcriptome (MeSH)</term>
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<term>Cheminées hydrothermales (microbiologie)</term>
<term>Ferrosulfoprotéines (génétique)</term>
<term>Ferrosulfoprotéines (métabolisme)</term>
<term>Hydrogenase (génétique)</term>
<term>Hydrogenase (métabolisme)</term>
<term>Océans et mers (MeSH)</term>
<term>Protéines bactériennes (génétique)</term>
<term>Protéines bactériennes (métabolisme)</term>
<term>Soufre (métabolisme)</term>
<term>Thermococcaceae (génétique)</term>
<term>Thermococcaceae (métabolisme)</term>
<term>Transcriptome (MeSH)</term>
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<term>Hydrogenase</term>
<term>Iron-Sulfur Proteins</term>
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<term>Hydrogenase</term>
<term>Iron-Sulfur Proteins</term>
<term>Sulfur</term>
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<front><div type="abstract" xml:lang="en">The hyperthermo-piezophilic archaeon <i>Palaeococcus pacificus</i>
 DY20341<sup>T</sup>
, isolated from East Pacific hydrothermal sediments, can utilize elemental sulfur as a terminal acceptor to simulate growth. To gain insight into sulfur metabolism, we performed a genomic and transcriptional analysis of <i>Pa. pacificus</i>
 DY20341<sup>T</sup>
 with/without elemental sulfur as an electron acceptor. In the 2001 protein-coding sequences of the genome, transcriptomic analysis showed that 108 genes increased (by up to 75.1 fold) and 336 genes decreased (by up to 13.9 fold) in the presence of elemental sulfur. <i>Palaeococcus pacificus</i>
 cultured with elemental sulfur promoted the following: the induction of membrane-bound hydrogenase (MBX), NADH:polysulfide oxidoreductase (NPSOR), NAD(P)H sulfur oxidoreductase (Nsr), sulfide dehydrogenase (SuDH), connected to the sulfur-reducing process, the upregulation of iron and nickel/cobalt transfer, iron-sulfur cluster-carrying proteins (NBP35), and some iron-sulfur cluster-containing proteins (SipA, SAM, CobQ, etc.). The accumulation of metal ions might further impact on regulators, e.g., SurR and TrmB. For growth in proteinous media without elemental sulfur, cells promoted flagelin, peptide/amino acids transporters, and maltose/sugar transporters to upregulate protein and starch/sugar utilization processes and riboflavin and thiamin biosynthesis. This indicates how strain DY20341<sup>T</sup>
 can adapt to different living conditions with/without elemental sulfur in the hydrothermal fields.</div>
</front>
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 DY20341<sup>T</sup>
 from Deep-Sea Hydrothermal Sediments.</ArticleTitle>
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<Abstract><AbstractText>The hyperthermo-piezophilic archaeon <i>Palaeococcus pacificus</i>
 DY20341<sup>T</sup>
, isolated from East Pacific hydrothermal sediments, can utilize elemental sulfur as a terminal acceptor to simulate growth. To gain insight into sulfur metabolism, we performed a genomic and transcriptional analysis of <i>Pa. pacificus</i>
 DY20341<sup>T</sup>
 with/without elemental sulfur as an electron acceptor. In the 2001 protein-coding sequences of the genome, transcriptomic analysis showed that 108 genes increased (by up to 75.1 fold) and 336 genes decreased (by up to 13.9 fold) in the presence of elemental sulfur. <i>Palaeococcus pacificus</i>
 cultured with elemental sulfur promoted the following: the induction of membrane-bound hydrogenase (MBX), NADH:polysulfide oxidoreductase (NPSOR), NAD(P)H sulfur oxidoreductase (Nsr), sulfide dehydrogenase (SuDH), connected to the sulfur-reducing process, the upregulation of iron and nickel/cobalt transfer, iron-sulfur cluster-carrying proteins (NBP35), and some iron-sulfur cluster-containing proteins (SipA, SAM, CobQ, etc.). The accumulation of metal ions might further impact on regulators, e.g., SurR and TrmB. For growth in proteinous media without elemental sulfur, cells promoted flagelin, peptide/amino acids transporters, and maltose/sugar transporters to upregulate protein and starch/sugar utilization processes and riboflavin and thiamin biosynthesis. This indicates how strain DY20341<sup>T</sup>
 can adapt to different living conditions with/without elemental sulfur in the hydrothermal fields.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Zeng</LastName>
<ForeName>Xiang</ForeName>
<Initials>X</Initials>
<AffiliationInfo><Affiliation>Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, Ministry of Natural Resources, No.178 Daxue Road, Xiamen 361005, China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Zhang</LastName>
<ForeName>Xiaobo</ForeName>
<Initials>X</Initials>
<AffiliationInfo><Affiliation>Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, Ministry of Natural Resources, No.178 Daxue Road, Xiamen 361005, China.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>School of public health, Xinjiang Medical University, No.393 Xinyi Road, Urumchi 830011, China.</Affiliation>
</AffiliationInfo>
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<Author ValidYN="Y"><LastName>Shao</LastName>
<ForeName>Zongze</ForeName>
<Initials>Z</Initials>
<AffiliationInfo><Affiliation>Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, Ministry of Natural Resources, No.178 Daxue Road, Xiamen 361005, China.</Affiliation>
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Metabolic Adaptation to Sulfur of Hyperthermophilic Palaeococcus pacificus DY20341T from Deep-Sea Hydrothermal Sediments.

Metabolic Adaptation to Sulfur of Hyperthermophilic Palaeococcus pacificus DY20341T from Deep-Sea Hydrothermal Sediments.

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